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install biom-format from conda
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.github/workflows/qiita-ci.yml

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@@ -96,6 +96,7 @@ jobs:
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export REDBIOM_HOST="http://localhost:7379"
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pip install . --no-binary redbiom
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conda install -c conda-forge --yes biom-format
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pwd
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mkdir ~/.qiita_plugins
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setup.py

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@@ -102,7 +102,7 @@
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scripts=glob('scripts/*'),
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# making sure that numpy is installed before biom
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setup_requires=['numpy', 'cython'],
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install_requires=['psycopg2', 'click', 'bcrypt', 'pandas', 'future',
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install_requires=['psycopg2', 'click', 'bcrypt', 'pandas',
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'biom-format', 'tornado<6.0', 'toredis', 'redis',
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'scp', 'pyparsing', 'h5py', 'natsort', 'nose', 'pep8',
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'networkx', 'humanize', 'wtforms<3.0.0', 'nltk',

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